Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Gm23272-201ENSMUST00000104053 129 ntBASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Gm11451-201ENSMUST00000118946 630 ntBASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Gm22138-201ENSMUST00000158748 128 ntBASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Mir7076-201ENSMUST00000183519 74 ntBASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga4Q91XY4 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdhga4Q91XY4 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdhga4Q91XY4 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Pcdhga4Q91XY4 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdhga4Q91XY4 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.02□□□□□ -0.64
Pcdhga4Q91XY4 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdhga4Q91XY4 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Pcdhga4Q91XY4 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Gm4294-201ENSMUST00000105169 614 ntBASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Gm37299-201ENSMUST00000193951 826 ntBASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Gm44315-201ENSMUST00000203041 219 ntBASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Gm43966-201ENSMUST00000203301 612 ntBASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Pcdhga4Q91XY4 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms