Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Gm10417-201ENSMUST00000194341 3522 ntBASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Dopey2-207ENSMUST00000227156 7340 ntBASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Gm11424-201ENSMUST00000121929 829 ntBASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Gm5616-201ENSMUST00000165252 384 ntBASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Gm8741-201ENSMUST00000174736 384 ntBASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Gm5745-201ENSMUST00000183748 313 ntBASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Gm6621-201ENSMUST00000193251 772 ntBASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc28bQ8CEG5 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Gm13296-201ENSMUST00000117854 997 ntBASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Gm12241-201ENSMUST00000118330 726 ntBASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Gm24074-201ENSMUST00000158178 260 ntBASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Cdh18-207ENSMUST00000226693 2165 ntBASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc28bQ8CEG5 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms