Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Gm13611-201ENSMUST00000118269 318 ntBASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Gm42867-201ENSMUST00000202995 469 ntBASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Gm6722-201ENSMUST00000221586 390 ntBASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc87Q8CDL9 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Gm23251-201ENSMUST00000103773 110 ntBASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Gm15617-201ENSMUST00000118973 771 ntBASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Gm42997-202ENSMUST00000200321 985 ntBASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.81□□□□□ -0.52
Ccdc87Q8CDL9 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms