Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Airn-204ENSMUST00000160932 842 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Gm6633-201ENSMUST00000173851 270 ntBASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 1700034B16Rik-201ENSMUST00000180957 722 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Gm42790-201ENSMUST00000201268 969 ntBASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Gm13120-201ENSMUST00000117343 1446 ntBASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Gm13104-201ENSMUST00000119651 1446 ntBASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pabpn1Q8CCS6 Gm37145-201ENSMUST00000193540 2756 ntBASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Matn2-206ENSMUST00000228570 2798 ntBASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Gm42833-201ENSMUST00000196019 2124 ntBASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Gm43972-201ENSMUST00000181398 1467 ntBASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Gm13975-201ENSMUST00000119253 782 ntBASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Gm11800-201ENSMUST00000120050 579 ntBASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Gm5710-201ENSMUST00000183020 995 ntBASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Mir7011-201ENSMUST00000183768 73 ntBASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Gm37860-201ENSMUST00000195380 1034 ntBASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Gm42617-201ENSMUST00000197640 1229 ntBASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 E330011O21Rik-201ENSMUST00000209468 1107 ntTSL 5 BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 AC105950.2-201ENSMUST00000220938 368 ntBASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Gm44907-201ENSMUST00000207423 1633 ntBASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pabpn1Q8CCS6 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm5270-201ENSMUST00000121506 1002 ntBASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm14370-201ENSMUST00000122460 868 ntBASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm15273-201ENSMUST00000142302 868 ntBASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm7023-201ENSMUST00000147295 868 ntBASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm17228-201ENSMUST00000165006 491 ntBASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Mir5108-201ENSMUST00000175276 85 ntBASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm14357-201ENSMUST00000178352 868 ntBASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm14361-201ENSMUST00000178547 868 ntBASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm14348-201ENSMUST00000179183 868 ntBASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm5801-201ENSMUST00000182247 780 ntBASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm4891-201ENSMUST00000182279 912 ntBASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm34780-201ENSMUST00000193896 949 ntBASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm37261-201ENSMUST00000194360 1101 ntBASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 AC162893.1-201ENSMUST00000207732 1085 ntBASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 A930033M14Rik-201ENSMUST00000217206 400 ntBASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm35696-202ENSMUST00000220364 778 ntTSL 5 BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Lgals9-201ENSMUST00000073001 1074 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms