Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gm10288-201ENSMUST00000084614 537 ntBASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Spata33-207ENSMUST00000212760 4074 ntBASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Gm43179-201ENSMUST00000198797 275 ntBASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nhlrc3Q8CCH2 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.4□□□□□ -0.91
Nhlrc3Q8CCH2 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nhlrc3Q8CCH2 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.4□□□□□ -0.91
Nhlrc3Q8CCH2 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.4□□□□□ -0.91
Nhlrc3Q8CCH2 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.91
Nhlrc3Q8CCH2 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nhlrc3Q8CCH2 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Nhlrc3Q8CCH2 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.91
Nhlrc3Q8CCH2 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nhlrc3Q8CCH2 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nhlrc3Q8CCH2 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Nhlrc3Q8CCH2 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nhlrc3Q8CCH2 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nhlrc3Q8CCH2 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Nhlrc3Q8CCH2 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nhlrc3Q8CCH2 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nhlrc3Q8CCH2 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nhlrc3Q8CCH2 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nhlrc3Q8CCH2 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nhlrc3Q8CCH2 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nhlrc3Q8CCH2 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Nhlrc3Q8CCH2 Nln-205ENSMUST00000224945 2486 ntBASIC9.39□□□□□ -0.91
Nhlrc3Q8CCH2 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nhlrc3Q8CCH2 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Nhlrc3Q8CCH2 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms