Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps53Q8CCB4 Gm38151-201ENSMUST00000195085 289 ntBASIC13□□□□□ -0.33
Vps53Q8CCB4 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps53Q8CCB4 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13□□□□□ -0.33
Vps53Q8CCB4 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps53Q8CCB4 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps53Q8CCB4 AC165154.1-201ENSMUST00000226661 340 ntBASIC13□□□□□ -0.33
Vps53Q8CCB4 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vps53Q8CCB4 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13□□□□□ -0.33
Vps53Q8CCB4 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13□□□□□ -0.33
Vps53Q8CCB4 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vps53Q8CCB4 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps53Q8CCB4 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps53Q8CCB4 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps53Q8CCB4 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps53Q8CCB4 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Vps53Q8CCB4 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps53Q8CCB4 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps53Q8CCB4 Gm44573-201ENSMUST00000191753 2370 ntBASIC13□□□□□ -0.33
Vps53Q8CCB4 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vps53Q8CCB4 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps53Q8CCB4 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vps53Q8CCB4 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps53Q8CCB4 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Gm11801-201ENSMUST00000117807 746 ntBASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Gm15744-201ENSMUST00000161734 213 ntBASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Gm20495-201ENSMUST00000173902 235 ntBASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Gm29410-201ENSMUST00000188383 694 ntBASIC12.99□□□□□ -0.33
Vps53Q8CCB4 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Gm37981-201ENSMUST00000194280 535 ntBASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Gm25201-201ENSMUST00000083093 170 ntBASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Vps53Q8CCB4 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.98□□□□□ -0.33
Vps53Q8CCB4 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Gm44008-201ENSMUST00000204345 412 ntBASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Gm9139-201ENSMUST00000218817 700 ntBASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Gm3619-201ENSMUST00000219947 775 ntBASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Gm4978-201ENSMUST00000071565 801 ntBASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms