Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Gm11573-201ENSMUST00000119956 394 ntBASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Mir5132-201ENSMUST00000175166 71 ntBASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Gm28032-201ENSMUST00000184104 96 ntBASIC11.46□□□□□ -0.57
Trub1Q8C0D0 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Gm43163-201ENSMUST00000196571 442 ntBASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Gm10263-201ENSMUST00000085163 300 ntBASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.46□□□□□ -0.58
Trub1Q8C0D0 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trub1Q8C0D0 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Trub1Q8C0D0 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trub1Q8C0D0 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trub1Q8C0D0 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.46□□□□□ -0.58
Trub1Q8C0D0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trub1Q8C0D0 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trub1Q8C0D0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trub1Q8C0D0 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Trub1Q8C0D0 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trub1Q8C0D0 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Gm23771-201ENSMUST00000178702 110 ntBASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Gm8197-202ENSMUST00000193422 934 ntBASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Gm43138-201ENSMUST00000199123 708 ntBASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.45□□□□□ -0.58
Trub1Q8C0D0 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms