Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Gm12337-201ENSMUST00000119634 400 ntBASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Gm14148-201ENSMUST00000122433 1008 ntBASIC12.91□□□□□ -0.34
Nup98Q6PFD9 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Gm24078-201ENSMUST00000158184 103 ntBASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Gm8525-201ENSMUST00000189674 861 ntBASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Gm4430-202ENSMUST00000193902 1041 ntBASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Gm18862-201ENSMUST00000204643 933 ntBASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Gm6518-201ENSMUST00000208450 342 ntBASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Klf10-203ENSMUST00000227920 2144 ntBASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Gm12397-201ENSMUST00000117674 615 ntBASIC12.9□□□□□ -0.34
Nup98Q6PFD9 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Gm5274-201ENSMUST00000182641 1003 ntBASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Gm18123-201ENSMUST00000210874 822 ntBASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Gm18122-201ENSMUST00000211390 904 ntBASIC12.9□□□□□ -0.34
Nup98Q6PFD9 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.9□□□□□ -0.34
Nup98Q6PFD9 AC164099.1-201ENSMUST00000227780 333 ntBASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Gm29101-201ENSMUST00000188329 1471 ntBASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Gm7572-201ENSMUST00000182616 766 ntBASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Mir6359-201ENSMUST00000183668 81 ntBASIC12.9□□□□□ -0.34
Nup98Q6PFD9 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 AC133517.1-201ENSMUST00000225825 594 ntBASIC12.9□□□□□ -0.34
Nup98Q6PFD9 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Gm8894-201ENSMUST00000074642 666 ntBASIC12.9□□□□□ -0.34
Nup98Q6PFD9 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup98Q6PFD9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nup98Q6PFD9 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nup98Q6PFD9 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Gm13688-201ENSMUST00000121557 608 ntBASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Gm26208-201ENSMUST00000158677 124 ntBASIC12.89□□□□□ -0.35
Nup98Q6PFD9 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Gm8022-201ENSMUST00000191763 904 ntBASIC12.89□□□□□ -0.35
Nup98Q6PFD9 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms