Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Gm19459-201ENSMUST00000176240 835 ntBASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Gm8197-202ENSMUST00000193422 934 ntBASIC12.45□□□□□ -0.42
Usp49Q6P9L4 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Gm43163-201ENSMUST00000196571 442 ntBASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Gm9132-201ENSMUST00000210182 832 ntBASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Mt1-202ENSMUST00000211807 1085 ntBASIC12.45□□□□□ -0.42
Usp49Q6P9L4 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Gm9645-201ENSMUST00000197131 792 ntBASIC12.44□□□□□ -0.42
Usp49Q6P9L4 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp49Q6P9L4 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.43□□□□□ -0.42
Usp49Q6P9L4 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Gm12208-201ENSMUST00000122004 163 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 183.6 ms