Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Clcn1Q64347 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Clcn1Q64347 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Clcn1Q64347 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Gm38055-201ENSMUST00000195353 2217 ntBASIC14.25□□□□□ -0.13
Clcn1Q64347 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Clcn1Q64347 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Gm11502-201ENSMUST00000120917 1211 ntBASIC14.25□□□□□ -0.13
Clcn1Q64347 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC14.25□□□□□ -0.13
Clcn1Q64347 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC14.25□□□□□ -0.13
Clcn1Q64347 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Clcn1Q64347 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC14.25□□□□□ -0.13
Clcn1Q64347 Gm44008-201ENSMUST00000204345 412 ntBASIC14.25□□□□□ -0.13
Clcn1Q64347 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC14.25□□□□□ -0.13
Clcn1Q64347 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC14.25□□□□□ -0.13
Clcn1Q64347 CT025642.1-201ENSMUST00000224734 1219 ntBASIC14.25□□□□□ -0.13
Clcn1Q64347 AC115304.2-201ENSMUST00000226399 332 ntBASIC14.25□□□□□ -0.13
Clcn1Q64347 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Clcn1Q64347 Gm9791-201ENSMUST00000060997 447 ntBASIC14.25□□□□□ -0.13
Clcn1Q64347 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Clcn1Q64347 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Clcn1Q64347 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcn1Q64347 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Clcn1Q64347 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Clcn1Q64347 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Clcn1Q64347 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Gm649-201ENSMUST00000117284 1054 ntBASIC14.24□□□□□ -0.13
Clcn1Q64347 Gm15982-201ENSMUST00000121681 554 ntBASIC14.24□□□□□ -0.13
Clcn1Q64347 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC14.24□□□□□ -0.13
Clcn1Q64347 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Clcn1Q64347 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC14.24□□□□□ -0.13
Clcn1Q64347 Gm28975-201ENSMUST00000186412 686 ntBASIC14.24□□□□□ -0.13
Clcn1Q64347 Gm31274-201ENSMUST00000197356 229 ntBASIC14.24□□□□□ -0.13
Clcn1Q64347 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC14.24□□□□□ -0.13
Clcn1Q64347 Gm6653-201ENSMUST00000218063 1288 ntBASIC14.24□□□□□ -0.13
Clcn1Q64347 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC14.24□□□□□ -0.13
Clcn1Q64347 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Gm38292-201ENSMUST00000192646 3045 ntBASIC14.24□□□□□ -0.13
Clcn1Q64347 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Gm37368-201ENSMUST00000193173 3212 ntBASIC14.24□□□□□ -0.13
Clcn1Q64347 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Clcn1Q64347 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcn1Q64347 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Clcn1Q64347 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC14.23□□□□□ -0.13
Clcn1Q64347 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.23□□□□□ -0.13
Clcn1Q64347 Gm44913-201ENSMUST00000208060 2990 ntBASIC14.23□□□□□ -0.13
Clcn1Q64347 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC14.23□□□□□ -0.13
Clcn1Q64347 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms