Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ift88Q61371 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Ift88Q61371 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ift88Q61371 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ift88Q61371 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ift88Q61371 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.27□□□□□ -0.44
Ift88Q61371 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ift88Q61371 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ift88Q61371 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Ift88Q61371 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ift88Q61371 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ift88Q61371 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ift88Q61371 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.27□□□□□ -0.45
Ift88Q61371 Gm14193-201ENSMUST00000105067 153 ntBASIC12.27□□□□□ -0.45
Ift88Q61371 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
Ift88Q61371 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.27□□□□□ -0.45
Ift88Q61371 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Gm13035-201ENSMUST00000117496 342 ntBASIC12.27□□□□□ -0.45
Ift88Q61371 Gm7851-201ENSMUST00000117574 323 ntBASIC12.27□□□□□ -0.45
Ift88Q61371 Gm13809-201ENSMUST00000117921 597 ntBASIC12.27□□□□□ -0.45
Ift88Q61371 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Ift88Q61371 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.27□□□□□ -0.45
Ift88Q61371 Gm11244-201ENSMUST00000121243 237 ntBASIC12.27□□□□□ -0.45
Ift88Q61371 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.27□□□□□ -0.45
Ift88Q61371 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.27□□□□□ -0.45
Ift88Q61371 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Gm19246-201ENSMUST00000173599 255 ntBASIC12.27□□□□□ -0.45
Ift88Q61371 Gm21778-201ENSMUST00000178779 471 ntBASIC12.27□□□□□ -0.45
Ift88Q61371 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ift88Q61371 Gm8574-201ENSMUST00000203207 924 ntBASIC12.27□□□□□ -0.45
Ift88Q61371 Gm45186-201ENSMUST00000206874 478 ntBASIC12.27□□□□□ -0.45
Ift88Q61371 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.27□□□□□ -0.45
Ift88Q61371 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Gm19208-201ENSMUST00000213861 912 ntBASIC12.27□□□□□ -0.45
Ift88Q61371 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.27□□□□□ -0.45
Ift88Q61371 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.27□□□□□ -0.45
Ift88Q61371 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.27□□□□□ -0.45
Ift88Q61371 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Ift88Q61371 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ift88Q61371 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ift88Q61371 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC12.27□□□□□ -0.45
Ift88Q61371 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Ift88Q61371 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ift88Q61371 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.27□□□□□ -0.45
Ift88Q61371 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ift88Q61371 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ift88Q61371 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.26□□□□□ -0.45
Ift88Q61371 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.26□□□□□ -0.45
Ift88Q61371 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.26□□□□□ -0.45
Ift88Q61371 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC12.26□□□□□ -0.45
Ift88Q61371 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ift88Q61371 Gm14592-201ENSMUST00000117201 560 ntBASIC12.26□□□□□ -0.45
Ift88Q61371 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.26□□□□□ -0.45
Ift88Q61371 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.26□□□□□ -0.45
Ift88Q61371 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.26□□□□□ -0.45
Ift88Q61371 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.26□□□□□ -0.45
Ift88Q61371 Gm24990-201ENSMUST00000157406 323 ntBASIC12.26□□□□□ -0.45
Ift88Q61371 Gm38321-201ENSMUST00000195053 235 ntBASIC12.26□□□□□ -0.45
Ift88Q61371 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.26□□□□□ -0.45
Ift88Q61371 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.26□□□□□ -0.45
Ift88Q61371 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.26□□□□□ -0.45
Ift88Q61371 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms