Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Gm12716-201ENSMUST00000120606 1354 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Gm5046-201ENSMUST00000100608 611 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Gm4917-201ENSMUST00000121452 650 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Gm44167-201ENSMUST00000204957 1878 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Gm2492-201ENSMUST00000221355 1394 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Gm44664-201ENSMUST00000206841 1786 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Mir683-2-201ENSMUST00000102099 109 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Stard4-202ENSMUST00000118990 648 ntTSL 2 BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Gm15369-201ENSMUST00000119681 394 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Gm14156-201ENSMUST00000121538 483 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Gm14108-201ENSMUST00000122234 494 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Gm13056-201ENSMUST00000142429 564 ntTSL 2 BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Mir683-1-201ENSMUST00000179371 109 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Gm7516-201ENSMUST00000186198 706 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 BC002189-201ENSMUST00000195674 598 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 AC130217.1-201ENSMUST00000224146 909 ntBASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Fsip1-202ENSMUST00000028821 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Tmem254c-201ENSMUST00000100818 1066 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm4891-201ENSMUST00000182279 912 ntBASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms