Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Gm25554-201ENSMUST00000158075 113 ntBASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Gm27441-201ENSMUST00000185000 105 ntBASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Gm38321-201ENSMUST00000195053 235 ntBASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Gm11573-201ENSMUST00000119956 394 ntBASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Id2-203ENSMUST00000222667 958 ntBASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Gm25580-201ENSMUST00000083409 327 ntBASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ctdnep1Q3TP92 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.78□□□□□ -0.36
Ctdnep1Q3TP92 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms