Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm35808-201ENSMUST00000204769 2602 ntBASIC9.1□□□□□ -0.95
Trim63Q38HM4 Zfp672-203ENSMUST00000065533 2619 ntBASIC9.1□□□□□ -0.95
Trim63Q38HM4 Ndst3-206ENSMUST00000154668 5570 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Lppos-201ENSMUST00000181640 1603 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Wdr93-201ENSMUST00000035622 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Zfp677-201ENSMUST00000056107 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Tcf7l2-208ENSMUST00000111654 3059 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm37633-201ENSMUST00000192858 2700 ntBASIC9.1□□□□□ -0.95
Trim63Q38HM4 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm15371-201ENSMUST00000117057 784 ntBASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm11960-201ENSMUST00000122068 925 ntBASIC9.1□□□□□ -0.95
Trim63Q38HM4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm8018-201ENSMUST00000173536 789 ntBASIC9.1□□□□□ -0.95
Trim63Q38HM4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm6114-201ENSMUST00000182472 968 ntBASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm8000-201ENSMUST00000188378 592 ntBASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm38241-201ENSMUST00000192641 898 ntBASIC9.1□□□□□ -0.95
Trim63Q38HM4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm5779-201ENSMUST00000218467 910 ntBASIC9.1□□□□□ -0.95
Trim63Q38HM4 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Cdk7-205ENSMUST00000225990 1159 ntBASIC9.1□□□□□ -0.95
Trim63Q38HM4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Hnrnpc-201ENSMUST00000111610 2847 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Lpin1-201ENSMUST00000067124 5581 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm21276-201ENSMUST00000179666 2626 ntBASIC9.1□□□□□ -0.95
Trim63Q38HM4 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Mpo-201ENSMUST00000020779 2750 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Dido1-205ENSMUST00000103056 4281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm45746-201ENSMUST00000212623 2447 ntBASIC9.1□□□□□ -0.95
Trim63Q38HM4 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Dlgap4-202ENSMUST00000070782 3303 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Sdhaf3-201ENSMUST00000040826 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Ttll7-201ENSMUST00000037942 7394 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Dcdc2a-202ENSMUST00000069614 6634 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Scml4-202ENSMUST00000105494 4166 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Phldb2-202ENSMUST00000076333 5347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Slc6a16-203ENSMUST00000213347 2865 ntAPPRIS P5 TSL 5 BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Gm15693-201ENSMUST00000120470 637 ntBASIC9.09□□□□□ -0.95
Trim63Q38HM4 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Trim63Q38HM4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Gm8502-201ENSMUST00000185708 901 ntBASIC9.09□□□□□ -0.95
Trim63Q38HM4 Gm21147-201ENSMUST00000186046 913 ntBASIC9.09□□□□□ -0.95
Trim63Q38HM4 Gm8510-201ENSMUST00000189202 895 ntBASIC9.09□□□□□ -0.95
Trim63Q38HM4 Gm2316-201ENSMUST00000190613 921 ntBASIC9.09□□□□□ -0.95
Trim63Q38HM4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC9.09□□□□□ -0.95
Trim63Q38HM4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Gm7430-201ENSMUST00000193824 1144 ntBASIC9.09□□□□□ -0.95
Trim63Q38HM4 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 AC073947.1-201ENSMUST00000216991 649 ntBASIC9.09□□□□□ -0.95
Trim63Q38HM4 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC9.09□□□□□ -0.95
Trim63Q38HM4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC9.09□□□□□ -0.95
Trim63Q38HM4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Hist1h2al-201ENSMUST00000091708 339 ntBASIC9.09□□□□□ -0.95
Trim63Q38HM4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms