Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm5388-201ENSMUST00000120059 1117 ntBASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm5397-201ENSMUST00000121081 1453 ntBASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm5578-201ENSMUST00000121490 1236 ntBASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm11454-201ENSMUST00000144092 714 ntTSL 3 BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm22484-201ENSMUST00000157992 306 ntBASIC5.65□□□□□ -1.5
Ush2AQ2QI47 A330094K24Rik-201ENSMUST00000180530 1027 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm16008-203ENSMUST00000181389 480 ntTSL 3 BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm28916-201ENSMUST00000186988 699 ntBASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 AC107851.1-201ENSMUST00000215982 417 ntTSL 2 BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Cldn8-201ENSMUST00000049697 2356 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm5605-201ENSMUST00000208940 1305 ntBASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm15520-201ENSMUST00000132097 1203 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Tcl1b2-202ENSMUST00000142230 851 ntTSL 5 BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm17068-201ENSMUST00000163135 980 ntBASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm7442-201ENSMUST00000197778 383 ntBASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm5586-201ENSMUST00000206264 795 ntBASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 1700017D01Rik-201ENSMUST00000025635 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 n-R5s25-201ENSMUST00000082923 119 ntBASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm4880-201ENSMUST00000207645 1696 ntBASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Zfp410-208ENSMUST00000222258 2329 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Gm17169-201ENSMUST00000171382 351 ntBASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Plscr5-201ENSMUST00000179751 1191 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Gm7672-201ENSMUST00000180915 872 ntBASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Gm29201-201ENSMUST00000189120 431 ntBASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Ighv5-5-201ENSMUST00000193826 329 ntBASIC5.65□□□□□ -1.51
Ush2AQ2QI47 AC132384.1-201ENSMUST00000219908 1195 ntBASIC5.65□□□□□ -1.51
Ush2AQ2QI47 AC093022.2-202ENSMUST00000227500 866 ntBASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 H2-M10.6-201ENSMUST00000041398 1407 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Gm4883-201ENSMUST00000085702 528 ntBASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ush2AQ2QI47 AC139845.1-201ENSMUST00000147013 1334 ntTSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Lypd4-201ENSMUST00000079306 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm14828-201ENSMUST00000119381 1155 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm11224-201ENSMUST00000120465 1111 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm12570-201ENSMUST00000122047 1030 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Mir1964-201ENSMUST00000158514 83 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 AC167234.1-201ENSMUST00000219929 279 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 AC122937.2-201ENSMUST00000228258 1051 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 1810009J06Rik-201ENSMUST00000076638 882 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms