Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm4978-201ENSMUST00000071565 801 ntBASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm25007-201ENSMUST00000083808 133 ntBASIC8.65□□□□□ -1.02
Cdx4Q07424 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Cdx4Q07424 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cdx4Q07424 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cdx4Q07424 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cdx4Q07424 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Cdx4Q07424 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC8.65□□□□□ -1.03
Cdx4Q07424 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Cdx4Q07424 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cdx4Q07424 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.03
Cdx4Q07424 Gm38089-201ENSMUST00000193585 1514 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Gm21998-201ENSMUST00000117552 1308 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 AC154537.1-201ENSMUST00000226101 1304 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Gm14193-201ENSMUST00000105067 153 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Gm14585-201ENSMUST00000120713 634 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 Gm12516-201ENSMUST00000120819 385 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 Gm15595-201ENSMUST00000120840 961 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 Gm15782-201ENSMUST00000121073 445 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC8.64□□□□□ -1.03
Cdx4Q07424 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC8.64□□□□□ -1.03
Cdx4Q07424 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 Gm9645-201ENSMUST00000197131 792 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Gm44506-201ENSMUST00000206278 965 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 Gm9463-201ENSMUST00000206707 601 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 CT485606.1-201ENSMUST00000213187 878 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 AC166992.1-201ENSMUST00000216356 565 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Gm4797-201ENSMUST00000219075 1283 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Gm18986-201ENSMUST00000216029 1986 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms