Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC13.98□□□□□ -0.17
Smarcc1P97496 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Smarcc1P97496 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Smarcc1P97496 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Smarcc1P97496 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Smarcc1P97496 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Smarcc1P97496 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Smarcc1P97496 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
Smarcc1P97496 Gm44153-201ENSMUST00000204162 1580 ntBASIC13.97□□□□□ -0.17
Smarcc1P97496 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarcc1P97496 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Smarcc1P97496 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.97□□□□□ -0.17
Smarcc1P97496 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Smarcc1P97496 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Smarcc1P97496 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarcc1P97496 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Gm24294-201ENSMUST00000158295 277 ntBASIC13.97□□□□□ -0.17
Smarcc1P97496 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC13.97□□□□□ -0.17
Smarcc1P97496 Mir6359-201ENSMUST00000183668 81 ntBASIC13.97□□□□□ -0.17
Smarcc1P97496 Gm5254-201ENSMUST00000188353 977 ntBASIC13.97□□□□□ -0.17
Smarcc1P97496 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13.97□□□□□ -0.17
Smarcc1P97496 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Smarcc1P97496 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Smarcc1P97496 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Smarcc1P97496 Gm5159-201ENSMUST00000212733 1652 ntBASIC13.97□□□□□ -0.17
Smarcc1P97496 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smarcc1P97496 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smarcc1P97496 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarcc1P97496 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc1P97496 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smarcc1P97496 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.96□□□□□ -0.17
Smarcc1P97496 AC107763.1-201ENSMUST00000226082 1365 ntBASIC13.96□□□□□ -0.17
Smarcc1P97496 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc1P97496 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc1P97496 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc1P97496 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc1P97496 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc1P97496 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc1P97496 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc1P97496 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc1P97496 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc1P97496 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smarcc1P97496 Gm16209-201ENSMUST00000118457 627 ntBASIC13.96□□□□□ -0.17
Smarcc1P97496 Gm10171-201ENSMUST00000126220 628 ntBASIC13.96□□□□□ -0.17
Smarcc1P97496 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc1P97496 Gm16305-201ENSMUST00000140747 556 ntBASIC13.96□□□□□ -0.17
Smarcc1P97496 Gm5526-201ENSMUST00000153604 423 ntBASIC13.96□□□□□ -0.17
Smarcc1P97496 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC13.96□□□□□ -0.17
Smarcc1P97496 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC13.96□□□□□ -0.17
Smarcc1P97496 Gm44498-201ENSMUST00000199509 111 ntBASIC13.96□□□□□ -0.17
Smarcc1P97496 Gm7183-201ENSMUST00000213870 1005 ntBASIC13.96□□□□□ -0.17
Smarcc1P97496 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC13.96□□□□□ -0.17
Smarcc1P97496 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Smarcc1P97496 Gm10233-201ENSMUST00000089275 628 ntBASIC13.96□□□□□ -0.17
Smarcc1P97496 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.96□□□□□ -0.17
Smarcc1P97496 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc1P97496 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc1P97496 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc1P97496 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc1P97496 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smarcc1P97496 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.96□□□□□ -0.18
Smarcc1P97496 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcc1P97496 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Smarcc1P97496 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcc1P97496 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcc1P97496 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.95□□□□□ -0.18
Smarcc1P97496 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms