Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.38□□□□□ -0.75
SgcdP82347 Spcs1-203ENSMUST00000226374 592 ntBASIC10.38□□□□□ -0.75
SgcdP82347 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcdP82347 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SgcdP82347 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SgcdP82347 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcdP82347 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcdP82347 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcdP82347 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.38□□□□□ -0.75
SgcdP82347 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcdP82347 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.38□□□□□ -0.75
SgcdP82347 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SgcdP82347 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcdP82347 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcdP82347 Gm6714-201ENSMUST00000218677 2330 ntBASIC10.38□□□□□ -0.75
SgcdP82347 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcdP82347 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Gm38910-201ENSMUST00000204630 2448 ntBASIC10.37□□□□□ -0.75
SgcdP82347 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.37□□□□□ -0.75
SgcdP82347 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.37□□□□□ -0.75
SgcdP82347 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SgcdP82347 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SgcdP82347 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Gm9062-201ENSMUST00000117712 727 ntBASIC10.37□□□□□ -0.75
SgcdP82347 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.37□□□□□ -0.75
SgcdP82347 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
SgcdP82347 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.37□□□□□ -0.75
SgcdP82347 Gm7722-201ENSMUST00000120646 741 ntBASIC10.37□□□□□ -0.75
SgcdP82347 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC10.37□□□□□ -0.75
SgcdP82347 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SgcdP82347 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SgcdP82347 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SgcdP82347 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SgcdP82347 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SgcdP82347 Gm9192-201ENSMUST00000183221 985 ntBASIC10.37□□□□□ -0.75
SgcdP82347 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SgcdP82347 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.37□□□□□ -0.75
SgcdP82347 Gm37835-201ENSMUST00000193305 361 ntBASIC10.37□□□□□ -0.75
SgcdP82347 Rprl1-202ENSMUST00000198476 238 ntBASIC10.37□□□□□ -0.75
SgcdP82347 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.37□□□□□ -0.75
SgcdP82347 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
SgcdP82347 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SgcdP82347 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SgcdP82347 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SgcdP82347 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SgcdP82347 Spata33-207ENSMUST00000212760 4074 ntBASIC10.37□□□□□ -0.75
SgcdP82347 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
SgcdP82347 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SgcdP82347 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcdP82347 AC131029.1-201ENSMUST00000226391 2929 ntBASIC10.37□□□□□ -0.75
SgcdP82347 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.37□□□□□ -0.75
SgcdP82347 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SgcdP82347 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SgcdP82347 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SgcdP82347 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
SgcdP82347 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SgcdP82347 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcdP82347 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SgcdP82347 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcdP82347 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcdP82347 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcdP82347 Gm8036-201ENSMUST00000118089 1718 ntBASIC10.36□□□□□ -0.75
SgcdP82347 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.36□□□□□ -0.75
SgcdP82347 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.36□□□□□ -0.75
SgcdP82347 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcdP82347 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcdP82347 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcdP82347 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcdP82347 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcdP82347 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SgcdP82347 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SgcdP82347 Gm14832-201ENSMUST00000121289 322 ntBASIC10.36□□□□□ -0.75
SgcdP82347 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SgcdP82347 Gm24749-201ENSMUST00000157838 343 ntBASIC10.36□□□□□ -0.75
SgcdP82347 Gm5070-201ENSMUST00000177599 862 ntBASIC10.36□□□□□ -0.75
SgcdP82347 Gm9211-201ENSMUST00000182882 975 ntBASIC10.36□□□□□ -0.75
SgcdP82347 Gm27438-201ENSMUST00000183480 110 ntBASIC10.36□□□□□ -0.75
SgcdP82347 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.36□□□□□ -0.75
SgcdP82347 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SgcdP82347 Gm7467-201ENSMUST00000185173 652 ntBASIC10.36□□□□□ -0.75
SgcdP82347 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.36□□□□□ -0.75
SgcdP82347 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms