Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm5529-201ENSMUST00000165691 891 ntBASIC12.07□□□□□ -0.48
CiitaP79621 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.07□□□□□ -0.48
CiitaP79621 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CiitaP79621 Gm22877-201ENSMUST00000175451 105 ntBASIC12.07□□□□□ -0.48
CiitaP79621 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CiitaP79621 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
CiitaP79621 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.07□□□□□ -0.48
CiitaP79621 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.07□□□□□ -0.48
CiitaP79621 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CiitaP79621 Gm37365-201ENSMUST00000193109 409 ntBASIC12.07□□□□□ -0.48
CiitaP79621 Gm5302-201ENSMUST00000202130 796 ntBASIC12.07□□□□□ -0.48
CiitaP79621 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.07□□□□□ -0.48
CiitaP79621 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.07□□□□□ -0.48
CiitaP79621 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.07□□□□□ -0.48
CiitaP79621 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.07□□□□□ -0.48
CiitaP79621 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.07□□□□□ -0.48
CiitaP79621 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CiitaP79621 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CiitaP79621 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
CiitaP79621 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CiitaP79621 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CiitaP79621 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CiitaP79621 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CiitaP79621 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.06□□□□□ -0.48
CiitaP79621 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CiitaP79621 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.06□□□□□ -0.48
CiitaP79621 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.06□□□□□ -0.48
CiitaP79621 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CiitaP79621 Gm6158-201ENSMUST00000109467 904 ntBASIC12.06□□□□□ -0.48
CiitaP79621 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.06□□□□□ -0.48
CiitaP79621 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.06□□□□□ -0.48
CiitaP79621 Gm14165-201ENSMUST00000121456 952 ntBASIC12.06□□□□□ -0.48
CiitaP79621 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.06□□□□□ -0.48
CiitaP79621 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.06□□□□□ -0.48
CiitaP79621 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Gm25830-201ENSMUST00000158923 132 ntBASIC12.06□□□□□ -0.48
CiitaP79621 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.06□□□□□ -0.48
CiitaP79621 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.06□□□□□ -0.48
CiitaP79621 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
CiitaP79621 Gm44216-201ENSMUST00000203942 157 ntBASIC12.06□□□□□ -0.48
CiitaP79621 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.06□□□□□ -0.48
CiitaP79621 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Capsl-202ENSMUST00000226688 739 ntBASIC12.06□□□□□ -0.48
CiitaP79621 Gm26670-202ENSMUST00000226862 340 ntBASIC12.06□□□□□ -0.48
CiitaP79621 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.06□□□□□ -0.48
CiitaP79621 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.06□□□□□ -0.48
CiitaP79621 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.06□□□□□ -0.48
CiitaP79621 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.06□□□□□ -0.48
CiitaP79621 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.06□□□□□ -0.48
CiitaP79621 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CiitaP79621 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.05□□□□□ -0.48
CiitaP79621 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
CiitaP79621 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.05□□□□□ -0.48
CiitaP79621 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.05□□□□□ -0.48
CiitaP79621 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CiitaP79621 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CiitaP79621 Gm13351-201ENSMUST00000118087 414 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms