Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cux2P70298 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cux2P70298 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cux2P70298 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cux2P70298 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cux2P70298 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cux2P70298 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cux2P70298 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cux2P70298 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Cux2P70298 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cux2P70298 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux2P70298 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cux2P70298 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux2P70298 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Cux2P70298 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cux2P70298 Gm25804-201ENSMUST00000122785 188 ntBASIC17.9■□□□□ 0.46
Cux2P70298 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC17.9■□□□□ 0.46
Cux2P70298 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC17.9■□□□□ 0.46
Cux2P70298 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC17.9■□□□□ 0.46
Cux2P70298 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC17.9■□□□□ 0.46
Cux2P70298 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC17.9■□□□□ 0.46
Cux2P70298 Gm7255-201ENSMUST00000187371 908 ntBASIC17.9■□□□□ 0.46
Cux2P70298 Gm28180-201ENSMUST00000189608 722 ntBASIC17.9■□□□□ 0.46
Cux2P70298 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC17.9■□□□□ 0.46
Cux2P70298 AC122459.4-201ENSMUST00000228654 551 ntBASIC17.9■□□□□ 0.46
Cux2P70298 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux2P70298 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cux2P70298 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cux2P70298 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux2P70298 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux2P70298 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux2P70298 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux2P70298 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux2P70298 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux2P70298 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cux2P70298 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux2P70298 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux2P70298 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC17.9■□□□□ 0.46
Cux2P70298 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Cux2P70298 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Cux2P70298 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux2P70298 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cux2P70298 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux2P70298 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cux2P70298 Gm23908-201ENSMUST00000104599 132 ntBASIC17.89■□□□□ 0.46
Cux2P70298 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC17.89■□□□□ 0.46
Cux2P70298 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC17.89■□□□□ 0.46
Cux2P70298 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cux2P70298 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cux2P70298 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cux2P70298 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cux2P70298 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.46
Cux2P70298 Gm23521-201ENSMUST00000177845 110 ntBASIC17.89■□□□□ 0.46
Cux2P70298 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Cux2P70298 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Cux2P70298 Gm42710-201ENSMUST00000200608 985 ntBASIC17.89■□□□□ 0.46
Cux2P70298 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cux2P70298 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC17.89■□□□□ 0.46
Cux2P70298 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC17.89■□□□□ 0.46
Cux2P70298 CT025547.1-201ENSMUST00000225127 578 ntBASIC17.89■□□□□ 0.46
Cux2P70298 AC123698.1-201ENSMUST00000227090 402 ntBASIC17.89■□□□□ 0.46
Cux2P70298 Elobl-202ENSMUST00000082339 300 ntBASIC17.89■□□□□ 0.46
Cux2P70298 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC17.89■□□□□ 0.46
Cux2P70298 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cux2P70298 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux2P70298 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux2P70298 Gm38220-201ENSMUST00000195774 1447 ntBASIC17.89■□□□□ 0.45
Cux2P70298 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cux2P70298 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cux2P70298 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cux2P70298 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cux2P70298 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC17.89■□□□□ 0.45
Cux2P70298 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux2P70298 Gm27177-202ENSMUST00000183514 2703 ntBASIC17.89■□□□□ 0.45
Cux2P70298 Vps45-201ENSMUST00000015891 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux2P70298 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC17.89■□□□□ 0.45
Cux2P70298 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux2P70298 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cux2P70298 Gm22669-201ENSMUST00000158723 318 ntBASIC17.89■□□□□ 0.45
Cux2P70298 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cux2P70298 Gm24180-201ENSMUST00000179961 110 ntBASIC17.89■□□□□ 0.45
Cux2P70298 Gm38301-201ENSMUST00000195573 543 ntBASIC17.89■□□□□ 0.45
Cux2P70298 Gm32102-201ENSMUST00000196885 241 ntBASIC17.89■□□□□ 0.45
Cux2P70298 Gm45225-201ENSMUST00000206852 1139 ntBASIC17.89■□□□□ 0.45
Cux2P70298 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC17.89■□□□□ 0.45
Cux2P70298 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux2P70298 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cux2P70298 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux2P70298 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux2P70298 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cux2P70298 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cux2P70298 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cux2P70298 Adgrv1-214ENSMUST00000224088 1492 ntBASIC17.88■□□□□ 0.45
Cux2P70298 Gm44086-201ENSMUST00000203251 2349 ntBASIC17.88■□□□□ 0.45
Cux2P70298 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cux2P70298 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC17.88■□□□□ 0.45
Cux2P70298 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cux2P70298 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cux2P70298 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cux2P70298 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms