Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ybx1P62960 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ybx1P62960 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.43□□□□□ -0.58
Ybx1P62960 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Gm5178-201ENSMUST00000219380 898 ntBASIC11.43□□□□□ -0.58
Ybx1P62960 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.43□□□□□ -0.58
Ybx1P62960 AC138716.2-201ENSMUST00000226670 1016 ntBASIC11.43□□□□□ -0.58
Ybx1P62960 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ybx1P62960 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ybx1P62960 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ybx1P62960 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.43□□□□□ -0.58
Ybx1P62960 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.43□□□□□ -0.58
Ybx1P62960 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ybx1P62960 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Ybx1P62960 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ybx1P62960 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.42□□□□□ -0.58
Ybx1P62960 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.42□□□□□ -0.58
Ybx1P62960 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ybx1P62960 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ybx1P62960 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.42□□□□□ -0.58
Ybx1P62960 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ybx1P62960 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ybx1P62960 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.42□□□□□ -0.58
Ybx1P62960 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.42□□□□□ -0.58
Ybx1P62960 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Gm22937-201ENSMUST00000103954 131 ntBASIC11.42□□□□□ -0.58
Ybx1P62960 Snord17-201ENSMUST00000104526 238 ntBASIC11.42□□□□□ -0.58
Ybx1P62960 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Gm11952-201ENSMUST00000121172 821 ntBASIC11.42□□□□□ -0.58
Ybx1P62960 Gm25226-201ENSMUST00000158198 123 ntBASIC11.42□□□□□ -0.58
Ybx1P62960 Gm37782-201ENSMUST00000194879 678 ntBASIC11.42□□□□□ -0.58
Ybx1P62960 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Gm2448-201ENSMUST00000207080 559 ntBASIC11.42□□□□□ -0.58
Ybx1P62960 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.42□□□□□ -0.58
Ybx1P62960 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Gm10020-201ENSMUST00000081993 612 ntBASIC11.42□□□□□ -0.58
Ybx1P62960 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.42□□□□□ -0.58
Ybx1P62960 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ybx1P62960 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ybx1P62960 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.42□□□□□ -0.58
Ybx1P62960 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ybx1P62960 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.41□□□□□ -0.58
Ybx1P62960 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.41□□□□□ -0.58
Ybx1P62960 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ybx1P62960 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ybx1P62960 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ybx1P62960 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ybx1P62960 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ybx1P62960 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ybx1P62960 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ybx1P62960 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ybx1P62960 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ybx1P62960 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ybx1P62960 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ybx1P62960 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ybx1P62960 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms