Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nup43P59235 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Nup43P59235 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Nup43P59235 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nup43P59235 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.53□□□□□ -0.72
Nup43P59235 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Nup43P59235 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Gm26013-201ENSMUST00000104404 119 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Gm11667-201ENSMUST00000119828 486 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Gm4917-201ENSMUST00000121452 650 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Gm24398-201ENSMUST00000157870 109 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Gm22138-201ENSMUST00000158748 128 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.53□□□□□ -0.72
Nup43P59235 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Gm30946-201ENSMUST00000198288 724 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Gm18561-201ENSMUST00000206027 804 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.53□□□□□ -0.72
Nup43P59235 AC122876.1-201ENSMUST00000217619 825 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Nup43P59235 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.53□□□□□ -0.72
Nup43P59235 CT009718.3-201ENSMUST00000221116 367 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.53□□□□□ -0.72
Nup43P59235 AC102523.2-201ENSMUST00000227813 983 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Nup43P59235 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nup43P59235 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nup43P59235 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup43P59235 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.53□□□□□ -0.72
Nup43P59235 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Nup43P59235 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.52□□□□□ -0.72
Nup43P59235 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nup43P59235 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Nup43P59235 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nup43P59235 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nup43P59235 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Nup43P59235 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Nup43P59235 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Nup43P59235 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.52□□□□□ -0.73
Nup43P59235 Gm14892-201ENSMUST00000117636 267 ntBASIC10.52□□□□□ -0.73
Nup43P59235 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.52□□□□□ -0.73
Nup43P59235 Gm15197-201ENSMUST00000120526 478 ntBASIC10.52□□□□□ -0.73
Nup43P59235 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.52□□□□□ -0.73
Nup43P59235 Gm8197-202ENSMUST00000193422 934 ntBASIC10.52□□□□□ -0.73
Nup43P59235 Gm42657-201ENSMUST00000201746 211 ntBASIC10.52□□□□□ -0.73
Nup43P59235 Gm8285-201ENSMUST00000208293 759 ntBASIC10.52□□□□□ -0.73
Nup43P59235 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.52□□□□□ -0.73
Nup43P59235 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC10.52□□□□□ -0.73
Nup43P59235 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.52□□□□□ -0.73
Nup43P59235 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.52□□□□□ -0.73
Nup43P59235 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.52□□□□□ -0.73
Nup43P59235 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Nup43P59235 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Nup43P59235 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms