Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rrp1P56183 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rrp1P56183 Gm15566-201ENSMUST00000121130 590 ntBASIC12.53□□□□□ -0.4
Rrp1P56183 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Gm5733-201ENSMUST00000190232 939 ntBASIC12.53□□□□□ -0.4
Rrp1P56183 Gm29067-201ENSMUST00000190821 470 ntBASIC12.53□□□□□ -0.4
Rrp1P56183 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.53□□□□□ -0.4
Rrp1P56183 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rrp1P56183 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Rrp1P56183 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC12.53□□□□□ -0.4
Rrp1P56183 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.53□□□□□ -0.4
Rrp1P56183 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.53□□□□□ -0.4
Rrp1P56183 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Rrp1P56183 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rrp1P56183 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.52□□□□□ -0.4
Rrp1P56183 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rrp1P56183 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rrp1P56183 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rrp1P56183 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Rrp1P56183 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rrp1P56183 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.52□□□□□ -0.41
Rrp1P56183 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rrp1P56183 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Gm24891-201ENSMUST00000104391 136 ntBASIC12.52□□□□□ -0.41
Rrp1P56183 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Gm12217-201ENSMUST00000118858 696 ntBASIC12.52□□□□□ -0.41
Rrp1P56183 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rrp1P56183 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rrp1P56183 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rrp1P56183 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rrp1P56183 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rrp1P56183 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rrp1P56183 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.52□□□□□ -0.41
Rrp1P56183 Gm28032-201ENSMUST00000184104 96 ntBASIC12.52□□□□□ -0.41
Rrp1P56183 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Gm44506-201ENSMUST00000206278 965 ntBASIC12.52□□□□□ -0.41
Rrp1P56183 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.52□□□□□ -0.41
Rrp1P56183 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.52□□□□□ -0.41
Rrp1P56183 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rrp1P56183 Gm25125-201ENSMUST00000083340 136 ntBASIC12.52□□□□□ -0.41
Rrp1P56183 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rrp1P56183 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.52□□□□□ -0.41
Rrp1P56183 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.52□□□□□ -0.41
Rrp1P56183 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.52□□□□□ -0.41
Rrp1P56183 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.52□□□□□ -0.41
Rrp1P56183 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rrp1P56183 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrp1P56183 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.51□□□□□ -0.41
Rrp1P56183 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rrp1P56183 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.51□□□□□ -0.41
Rrp1P56183 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC12.51□□□□□ -0.41
Rrp1P56183 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rrp1P56183 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rrp1P56183 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Rrp1P56183 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rrp1P56183 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rrp1P56183 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.51□□□□□ -0.41
Rrp1P56183 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.51□□□□□ -0.41
Rrp1P56183 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Gm18827-201ENSMUST00000188341 790 ntBASIC12.51□□□□□ -0.41
Rrp1P56183 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms