Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ddx6P54823 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Ddx6P54823 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ddx6P54823 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Gm11475-201ENSMUST00000118482 476 ntBASIC11.34□□□□□ -0.59
Ddx6P54823 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.34□□□□□ -0.59
Ddx6P54823 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.34□□□□□ -0.59
Ddx6P54823 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Ddx6P54823 Gm18014-201ENSMUST00000183369 817 ntBASIC11.34□□□□□ -0.59
Ddx6P54823 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Gm9916-201ENSMUST00000192943 1228 ntBASIC11.34□□□□□ -0.59
Ddx6P54823 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Ddx6P54823 Gm42751-201ENSMUST00000198065 559 ntBASIC11.34□□□□□ -0.59
Ddx6P54823 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.34□□□□□ -0.59
Ddx6P54823 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.34□□□□□ -0.59
Ddx6P54823 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ddx6P54823 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC11.34□□□□□ -0.59
Ddx6P54823 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.34□□□□□ -0.59
Ddx6P54823 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.34□□□□□ -0.59
Ddx6P54823 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ddx6P54823 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.34□□□□□ -0.59
Ddx6P54823 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ddx6P54823 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ddx6P54823 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.34□□□□□ -0.59
Ddx6P54823 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ddx6P54823 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ddx6P54823 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Ddx6P54823 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.33□□□□□ -0.6
Ddx6P54823 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.33□□□□□ -0.6
Ddx6P54823 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ddx6P54823 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Ddx6P54823 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 Gm23745-201ENSMUST00000104230 125 ntBASIC11.33□□□□□ -0.6
Ddx6P54823 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Ddx6P54823 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Ddx6P54823 Gm11380-201ENSMUST00000118067 560 ntBASIC11.33□□□□□ -0.6
Ddx6P54823 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.33□□□□□ -0.6
Ddx6P54823 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.33□□□□□ -0.6
Ddx6P54823 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.33□□□□□ -0.6
Ddx6P54823 Gm18733-202ENSMUST00000174447 401 ntBASIC11.33□□□□□ -0.6
Ddx6P54823 Gm24328-201ENSMUST00000175104 67 ntBASIC11.33□□□□□ -0.6
Ddx6P54823 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 Mir6923-201ENSMUST00000184592 72 ntBASIC11.33□□□□□ -0.6
Ddx6P54823 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 AC140375.1-201ENSMUST00000225421 694 ntBASIC11.33□□□□□ -0.6
Ddx6P54823 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.33□□□□□ -0.6
Ddx6P54823 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Ddx6P54823 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
Ddx6P54823 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ddx6P54823 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.33□□□□□ -0.6
Ddx6P54823 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.33□□□□□ -0.6
Ddx6P54823 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx6P54823 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ddx6P54823 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms