Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Atxn1P54254 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Atxn1P54254 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.12□□□□□ -0.63
Atxn1P54254 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.12□□□□□ -0.63
Atxn1P54254 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.12□□□□□ -0.63
Atxn1P54254 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.12□□□□□ -0.63
Atxn1P54254 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.12□□□□□ -0.63
Atxn1P54254 Gm15197-201ENSMUST00000120526 478 ntBASIC11.12□□□□□ -0.63
Atxn1P54254 Gm14165-201ENSMUST00000121456 952 ntBASIC11.12□□□□□ -0.63
Atxn1P54254 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Atxn1P54254 Gm26047-201ENSMUST00000157308 113 ntBASIC11.12□□□□□ -0.63
Atxn1P54254 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Gm7211-201ENSMUST00000172692 1118 ntBASIC11.12□□□□□ -0.63
Atxn1P54254 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC11.12□□□□□ -0.63
Atxn1P54254 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.12□□□□□ -0.63
Atxn1P54254 Gm26047-202ENSMUST00000198840 115 ntBASIC11.12□□□□□ -0.63
Atxn1P54254 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Atxn1P54254 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Atxn1P54254 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Atxn1P54254 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Atxn1P54254 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.12□□□□□ -0.63
Atxn1P54254 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.12□□□□□ -0.63
Atxn1P54254 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.11□□□□□ -0.63
Atxn1P54254 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Atxn1P54254 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Atxn1P54254 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.11□□□□□ -0.63
Atxn1P54254 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.11□□□□□ -0.63
Atxn1P54254 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.11□□□□□ -0.63
Atxn1P54254 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Atxn1P54254 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Atxn1P54254 Gm23595-201ENSMUST00000104306 130 ntBASIC11.11□□□□□ -0.63
Atxn1P54254 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.11□□□□□ -0.63
Atxn1P54254 Gm6158-201ENSMUST00000109467 904 ntBASIC11.11□□□□□ -0.63
Atxn1P54254 Gm12418-201ENSMUST00000118116 942 ntBASIC11.11□□□□□ -0.63
Atxn1P54254 Gm12736-201ENSMUST00000119330 236 ntBASIC11.11□□□□□ -0.63
Atxn1P54254 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.11□□□□□ -0.63
Atxn1P54254 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Gm43506-201ENSMUST00000200675 753 ntBASIC11.11□□□□□ -0.63
Atxn1P54254 Gm18035-201ENSMUST00000211962 589 ntBASIC11.11□□□□□ -0.63
Atxn1P54254 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC11.11□□□□□ -0.63
Atxn1P54254 CT025603.1-201ENSMUST00000224040 448 ntBASIC11.11□□□□□ -0.63
Atxn1P54254 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.11□□□□□ -0.63
Atxn1P54254 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.11□□□□□ -0.63
Atxn1P54254 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Atxn1P54254 Rps3a2-201ENSMUST00000074245 792 ntBASIC11.11□□□□□ -0.63
Atxn1P54254 Rps3a3-201ENSMUST00000074680 795 ntBASIC11.11□□□□□ -0.63
Atxn1P54254 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Atxn1P54254 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.11□□□□□ -0.63
Atxn1P54254 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Atxn1P54254 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Atxn1P54254 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
Atxn1P54254 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms