Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdx2P43241 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cdx2P43241 Gm44605-201ENSMUST00000206892 949 ntBASIC10.61□□□□□ -0.71
Cdx2P43241 Gm44640-201ENSMUST00000206894 247 ntBASIC10.61□□□□□ -0.71
Cdx2P43241 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cdx2P43241 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC10.61□□□□□ -0.71
Cdx2P43241 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cdx2P43241 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdx2P43241 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdx2P43241 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdx2P43241 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdx2P43241 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdx2P43241 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cdx2P43241 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdx2P43241 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cdx2P43241 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cdx2P43241 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cdx2P43241 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Cdx2P43241 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdx2P43241 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdx2P43241 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.61□□□□□ -0.71
Cdx2P43241 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdx2P43241 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.61□□□□□ -0.71
Cdx2P43241 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdx2P43241 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdx2P43241 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cdx2P43241 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.6□□□□□ -0.71
Cdx2P43241 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cdx2P43241 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cdx2P43241 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Cdx2P43241 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.6□□□□□ -0.71
Cdx2P43241 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC10.6□□□□□ -0.71
Cdx2P43241 Gm8152-201ENSMUST00000120842 637 ntBASIC10.6□□□□□ -0.71
Cdx2P43241 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Cdx2P43241 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cdx2P43241 Gm7985-201ENSMUST00000183329 981 ntBASIC10.6□□□□□ -0.71
Cdx2P43241 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.6□□□□□ -0.71
Cdx2P43241 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Gm45258-201ENSMUST00000210042 853 ntBASIC10.6□□□□□ -0.71
Cdx2P43241 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC10.6□□□□□ -0.71
Cdx2P43241 AC154759.1-201ENSMUST00000224137 1159 ntBASIC10.6□□□□□ -0.71
Cdx2P43241 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Gm5513-201ENSMUST00000072982 1218 ntBASIC10.6□□□□□ -0.71
Cdx2P43241 Gm6564-201ENSMUST00000075377 619 ntBASIC10.6□□□□□ -0.71
Cdx2P43241 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cdx2P43241 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.6□□□□□ -0.71
Cdx2P43241 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC10.6□□□□□ -0.71
Cdx2P43241 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cdx2P43241 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.6□□□□□ -0.71
Cdx2P43241 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdx2P43241 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.59□□□□□ -0.71
Cdx2P43241 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC10.59□□□□□ -0.71
Cdx2P43241 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms