Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Cxcl12P40224 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC11.48□□□□□ -0.57
Cxcl12P40224 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cxcl12P40224 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cxcl12P40224 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cxcl12P40224 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.48□□□□□ -0.57
Cxcl12P40224 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.48□□□□□ -0.57
Cxcl12P40224 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Rgr-203ENSMUST00000225070 4704 ntBASIC11.47□□□□□ -0.57
Cxcl12P40224 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Cxcl12P40224 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.47□□□□□ -0.57
Cxcl12P40224 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.47□□□□□ -0.57
Cxcl12P40224 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.47□□□□□ -0.57
Cxcl12P40224 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.47□□□□□ -0.57
Cxcl12P40224 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.47□□□□□ -0.57
Cxcl12P40224 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Cxcl12P40224 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Cxcl12P40224 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cxcl12P40224 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cxcl12P40224 Mir1893-201ENSMUST00000122565 83 ntBASIC11.47□□□□□ -0.57
Cxcl12P40224 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC11.47□□□□□ -0.57
Cxcl12P40224 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.47□□□□□ -0.57
Cxcl12P40224 Gm27833-201ENSMUST00000184285 124 ntBASIC11.47□□□□□ -0.57
Cxcl12P40224 Gm7539-201ENSMUST00000189789 630 ntBASIC11.47□□□□□ -0.57
Cxcl12P40224 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC11.47□□□□□ -0.57
Cxcl12P40224 Gm33080-201ENSMUST00000205429 172 ntBASIC11.47□□□□□ -0.57
Cxcl12P40224 Gm45745-201ENSMUST00000211447 1180 ntBASIC11.47□□□□□ -0.57
Cxcl12P40224 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cxcl12P40224 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cxcl12P40224 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Cxcl12P40224 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcl12P40224 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Cxcl12P40224 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cxcl12P40224 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.46□□□□□ -0.57
Cxcl12P40224 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cxcl12P40224 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cxcl12P40224 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Snord17-201ENSMUST00000104526 238 ntBASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm9095-201ENSMUST00000117607 881 ntBASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm11919-201ENSMUST00000117609 721 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms