Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Chd1P40201 Gm16184-201ENSMUST00000162324 573 ntBASIC16.32■□□□□ 0.2
Chd1P40201 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC16.32■□□□□ 0.2
Chd1P40201 Gm5302-201ENSMUST00000202130 796 ntBASIC16.32■□□□□ 0.2
Chd1P40201 Gm6457-201ENSMUST00000066378 815 ntBASIC16.32■□□□□ 0.2
Chd1P40201 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 AC124397.2-201ENSMUST00000225575 2215 ntBASIC16.32■□□□□ 0.2
Chd1P40201 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC16.32■□□□□ 0.2
Chd1P40201 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Chd1P40201 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chd1P40201 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chd1P40201 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.31■□□□□ 0.2
Chd1P40201 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 H2afb2-201ENSMUST00000118616 348 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Chd1P40201 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Gm12424-201ENSMUST00000179673 447 ntBASIC16.31■□□□□ 0.2
Chd1P40201 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Chd1P40201 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Chd1P40201 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC16.31■□□□□ 0.2
Chd1P40201 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Chd1P40201 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Gm43482-201ENSMUST00000202797 1861 ntBASIC16.31■□□□□ 0.2
Chd1P40201 Katnal2-211ENSMUST00000154665 1515 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC16.31■□□□□ 0.2
Chd1P40201 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Chd1P40201 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Gm22900-201ENSMUST00000104538 130 ntBASIC16.31■□□□□ 0.2
Chd1P40201 Olfr281-201ENSMUST00000109163 1058 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Chd1P40201 Apoo-201ENSMUST00000113895 1173 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Gm12221-201ENSMUST00000125096 1131 ntBASIC16.31■□□□□ 0.2
Chd1P40201 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC16.31■□□□□ 0.2
Chd1P40201 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Chd1P40201 Ctdp1-203ENSMUST00000161003 1199 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Gm27953-201ENSMUST00000185171 143 ntBASIC16.31■□□□□ 0.2
Chd1P40201 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC16.31■□□□□ 0.2
Chd1P40201 Gm6342-201ENSMUST00000204344 766 ntBASIC16.31■□□□□ 0.2
Chd1P40201 Gm42067-202ENSMUST00000210917 410 ntTSL 2 BASIC16.31■□□□□ 0.2
Chd1P40201 Gm2981-201ENSMUST00000213947 694 ntBASIC16.31■□□□□ 0.2
Chd1P40201 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 AC158122.1-201ENSMUST00000227398 673 ntBASIC16.31■□□□□ 0.2
Chd1P40201 Gm8256-202ENSMUST00000227964 828 ntBASIC16.31■□□□□ 0.2
Chd1P40201 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1P40201 Gm4883-201ENSMUST00000085702 528 ntBASIC16.31■□□□□ 0.2
Chd1P40201 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1P40201 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Chd1P40201 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1P40201 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC16.3■□□□□ 0.2
Chd1P40201 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.3■□□□□ 0.2
Chd1P40201 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1P40201 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Chd1P40201 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1P40201 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1P40201 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Chd1P40201 Gm12619-201ENSMUST00000117369 385 ntBASIC16.3■□□□□ 0.2
Chd1P40201 Gm8022-201ENSMUST00000191763 904 ntBASIC16.3■□□□□ 0.2
Chd1P40201 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC16.3■□□□□ 0.2
Chd1P40201 AC156561.1-201ENSMUST00000224774 233 ntBASIC16.3■□□□□ 0.2
Chd1P40201 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1P40201 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Chd1P40201 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC16.3■□□□□ 0.2
Chd1P40201 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1P40201 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1P40201 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1P40201 AC153566.1-201ENSMUST00000216441 2057 ntBASIC16.3■□□□□ 0.2
Chd1P40201 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1P40201 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1P40201 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1P40201 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1P40201 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1P40201 Rad52-212ENSMUST00000162461 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms