Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC9.19□□□□□ -0.94
Timp3P39876 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.19□□□□□ -0.94
Timp3P39876 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.19□□□□□ -0.94
Timp3P39876 CT009536.2-201ENSMUST00000225370 665 ntBASIC9.19□□□□□ -0.94
Timp3P39876 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Timp3P39876 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Timp3P39876 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Gm10829-201ENSMUST00000202084 2988 ntBASIC9.19□□□□□ -0.94
Timp3P39876 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.19□□□□□ -0.94
Timp3P39876 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Timp3P39876 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.19□□□□□ -0.94
Timp3P39876 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Timp3P39876 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Timp3P39876 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.18□□□□□ -0.94
Timp3P39876 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.18□□□□□ -0.94
Timp3P39876 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.18□□□□□ -0.94
Timp3P39876 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Timp3P39876 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Timp3P39876 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Gm14892-201ENSMUST00000117636 267 ntBASIC9.18□□□□□ -0.94
Timp3P39876 Gm11500-201ENSMUST00000118237 601 ntBASIC9.18□□□□□ -0.94
Timp3P39876 Gm11700-201ENSMUST00000119409 403 ntBASIC9.18□□□□□ -0.94
Timp3P39876 Gm12856-201ENSMUST00000119471 1293 ntBASIC9.18□□□□□ -0.94
Timp3P39876 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC9.18□□□□□ -0.94
Timp3P39876 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.18□□□□□ -0.94
Timp3P39876 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Mir1956-201ENSMUST00000157748 65 ntBASIC9.18□□□□□ -0.94
Timp3P39876 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Gm8492-201ENSMUST00000182375 987 ntBASIC9.18□□□□□ -0.94
Timp3P39876 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Timp3P39876 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.18□□□□□ -0.94
Timp3P39876 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Timp3P39876 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 AC166341.2-201ENSMUST00000220571 120 ntBASIC9.18□□□□□ -0.94
Timp3P39876 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC9.18□□□□□ -0.94
Timp3P39876 AC136376.2-201ENSMUST00000228819 490 ntBASIC9.18□□□□□ -0.94
Timp3P39876 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Timp3P39876 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Timp3P39876 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Timp3P39876 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Timp3P39876 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Timp3P39876 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Timp3P39876 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Timp3P39876 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Timp3P39876 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Timp3P39876 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Timp3P39876 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Timp3P39876 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Timp3P39876 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Timp3P39876 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Timp3P39876 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Timp3P39876 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Timp3P39876 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Timp3P39876 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Timp3P39876 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.17□□□□□ -0.94
Timp3P39876 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Timp3P39876 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Timp3P39876 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Timp3P39876 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms