Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Vcam1P29533 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vcam1P29533 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcam1P29533 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcam1P29533 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcam1P29533 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcam1P29533 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcam1P29533 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcam1P29533 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcam1P29533 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Vcam1P29533 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.77□□□□□ -0.36
Vcam1P29533 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcam1P29533 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcam1P29533 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcam1P29533 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 Gm12461-201ENSMUST00000120231 1239 ntBASIC12.77□□□□□ -0.37
Vcam1P29533 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.77□□□□□ -0.37
Vcam1P29533 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.77□□□□□ -0.37
Vcam1P29533 Gm37782-201ENSMUST00000194879 678 ntBASIC12.77□□□□□ -0.37
Vcam1P29533 Gm45094-201ENSMUST00000207013 617 ntBASIC12.77□□□□□ -0.37
Vcam1P29533 Gm8162-201ENSMUST00000213951 665 ntBASIC12.77□□□□□ -0.37
Vcam1P29533 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 Gm6478-201ENSMUST00000099450 742 ntBASIC12.77□□□□□ -0.37
Vcam1P29533 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vcam1P29533 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Vcam1P29533 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcam1P29533 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vcam1P29533 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Vcam1P29533 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.77□□□□□ -0.37
Vcam1P29533 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vcam1P29533 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vcam1P29533 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.76□□□□□ -0.37
Vcam1P29533 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Vcam1P29533 Gm43547-201ENSMUST00000197729 328 ntBASIC12.76□□□□□ -0.37
Vcam1P29533 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Vcam1P29533 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC12.76□□□□□ -0.37
Vcam1P29533 Gm18010-201ENSMUST00000203553 202 ntBASIC12.76□□□□□ -0.37
Vcam1P29533 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC12.76□□□□□ -0.37
Vcam1P29533 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Vcam1P29533 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.76□□□□□ -0.37
Vcam1P29533 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Gm37058-201ENSMUST00000193393 1644 ntBASIC12.76□□□□□ -0.37
Vcam1P29533 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vcam1P29533 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcam1P29533 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Vcam1P29533 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vcam1P29533 Gm12947-201ENSMUST00000116114 420 ntBASIC12.75□□□□□ -0.37
Vcam1P29533 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Gm8659-201ENSMUST00000120024 1084 ntBASIC12.75□□□□□ -0.37
Vcam1P29533 Gm16459-201ENSMUST00000121443 686 ntBASIC12.75□□□□□ -0.37
Vcam1P29533 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.75□□□□□ -0.37
Vcam1P29533 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms