Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC9.91□□□□□ -0.82
P20040 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Gm45089-201ENSMUST00000208082 2040 ntBASIC9.91□□□□□ -0.82
P20040 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.91□□□□□ -0.82
P20040 Gm11783-201ENSMUST00000119549 885 ntBASIC9.91□□□□□ -0.82
P20040 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Gm9211-201ENSMUST00000182882 975 ntBASIC9.91□□□□□ -0.82
P20040 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC9.91□□□□□ -0.82
P20040 Gm6108-201ENSMUST00000208365 367 ntBASIC9.91□□□□□ -0.82
P20040 Gm6867-201ENSMUST00000219165 425 ntBASIC9.91□□□□□ -0.82
P20040 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.91□□□□□ -0.82
P20040 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.91□□□□□ -0.82
P20040 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Gm38376-201ENSMUST00000195493 2253 ntBASIC9.91□□□□□ -0.82
P20040 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.91□□□□□ -0.82
P20040 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
P20040 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P20040 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.91□□□□□ -0.82
P20040 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
P20040 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
P20040 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
P20040 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.9□□□□□ -0.82
P20040 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.9□□□□□ -0.82
P20040 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.9□□□□□ -0.82
P20040 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
P20040 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
P20040 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC9.9□□□□□ -0.82
P20040 Gm12579-201ENSMUST00000118040 783 ntBASIC9.9□□□□□ -0.82
P20040 Gm12463-201ENSMUST00000118271 849 ntBASIC9.9□□□□□ -0.82
P20040 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.9□□□□□ -0.82
P20040 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.9□□□□□ -0.82
P20040 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.9□□□□□ -0.82
P20040 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.9□□□□□ -0.82
P20040 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.9□□□□□ -0.82
P20040 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC9.9□□□□□ -0.82
P20040 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.9□□□□□ -0.82
P20040 Gm37835-201ENSMUST00000193305 361 ntBASIC9.9□□□□□ -0.82
P20040 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC9.9□□□□□ -0.82
P20040 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.9□□□□□ -0.82
P20040 Mir7686-201ENSMUST00000200604 57 ntBASIC9.9□□□□□ -0.82
P20040 Gm43947-201ENSMUST00000203019 959 ntBASIC9.9□□□□□ -0.82
P20040 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.9□□□□□ -0.82
P20040 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.9□□□□□ -0.82
P20040 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
P20040 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
P20040 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P20040 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
P20040 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
P20040 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
P20040 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
P20040 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
P20040 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.9□□□□□ -0.83
P20040 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
P20040 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
P20040 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
P20040 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
P20040 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.83
P20040 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
P20040 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
P20040 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
P20040 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms