Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
PdgfrbP05622 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
PdgfrbP05622 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.35□□□□□ -0.59
PdgfrbP05622 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
PdgfrbP05622 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.35□□□□□ -0.59
PdgfrbP05622 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.35□□□□□ -0.59
PdgfrbP05622 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 BC043934-202ENSMUST00000185694 2356 ntBASIC11.34□□□□□ -0.59
PdgfrbP05622 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Gm42478-201ENSMUST00000199252 1467 ntBASIC11.34□□□□□ -0.59
PdgfrbP05622 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.34□□□□□ -0.59
PdgfrbP05622 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.34□□□□□ -0.59
PdgfrbP05622 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Gm24992-201ENSMUST00000157412 130 ntBASIC11.34□□□□□ -0.59
PdgfrbP05622 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
PdgfrbP05622 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.34□□□□□ -0.59
PdgfrbP05622 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.34□□□□□ -0.59
PdgfrbP05622 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Gm37905-201ENSMUST00000195310 341 ntBASIC11.34□□□□□ -0.59
PdgfrbP05622 Gm43058-201ENSMUST00000197645 625 ntBASIC11.34□□□□□ -0.59
PdgfrbP05622 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC11.34□□□□□ -0.59
PdgfrbP05622 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.34□□□□□ -0.59
PdgfrbP05622 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.34□□□□□ -0.59
PdgfrbP05622 Gm5451-201ENSMUST00000080545 579 ntBASIC11.34□□□□□ -0.59
PdgfrbP05622 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
PdgfrbP05622 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PdgfrbP05622 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
PdgfrbP05622 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
PdgfrbP05622 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
PdgfrbP05622 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
PdgfrbP05622 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.33□□□□□ -0.6
PdgfrbP05622 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PdgfrbP05622 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
PdgfrbP05622 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.33□□□□□ -0.6
PdgfrbP05622 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdgfrbP05622 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.33□□□□□ -0.6
PdgfrbP05622 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
PdgfrbP05622 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PdgfrbP05622 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.33□□□□□ -0.6
PdgfrbP05622 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdgfrbP05622 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
PdgfrbP05622 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.33□□□□□ -0.6
PdgfrbP05622 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdgfrbP05622 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdgfrbP05622 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdgfrbP05622 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
PdgfrbP05622 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.33□□□□□ -0.6
PdgfrbP05622 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.33□□□□□ -0.6
PdgfrbP05622 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PdgfrbP05622 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.33□□□□□ -0.6
PdgfrbP05622 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC11.33□□□□□ -0.6
PdgfrbP05622 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.33□□□□□ -0.6
PdgfrbP05622 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdgfrbP05622 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdgfrbP05622 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.33□□□□□ -0.6
PdgfrbP05622 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms