Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Hoxa3P02831 n-R5s211-201ENSMUST00000093689 119 ntBASIC9.38□□□□□ -0.91
Hoxa3P02831 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.38□□□□□ -0.91
Hoxa3P02831 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Hoxa3P02831 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Hoxa3P02831 Gm25063-201ENSMUST00000104666 94 ntBASIC9.37□□□□□ -0.91
Hoxa3P02831 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Hoxa3P02831 Gm15528-201ENSMUST00000117821 864 ntBASIC9.37□□□□□ -0.91
Hoxa3P02831 Gm13422-201ENSMUST00000118834 504 ntBASIC9.37□□□□□ -0.91
Hoxa3P02831 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.37□□□□□ -0.91
Hoxa3P02831 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC9.37□□□□□ -0.91
Hoxa3P02831 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC9.37□□□□□ -0.91
Hoxa3P02831 Gm23694-201ENSMUST00000179335 110 ntBASIC9.37□□□□□ -0.91
Hoxa3P02831 Gm19015-201ENSMUST00000184002 1189 ntBASIC9.37□□□□□ -0.91
Hoxa3P02831 Gm29155-201ENSMUST00000185910 269 ntBASIC9.37□□□□□ -0.91
Hoxa3P02831 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC9.37□□□□□ -0.91
Hoxa3P02831 Gm8197-202ENSMUST00000193422 934 ntBASIC9.37□□□□□ -0.91
Hoxa3P02831 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC9.37□□□□□ -0.91
Hoxa3P02831 Gm3028-201ENSMUST00000213805 1119 ntBASIC9.37□□□□□ -0.91
Hoxa3P02831 Gm9139-201ENSMUST00000218817 700 ntBASIC9.37□□□□□ -0.91
Hoxa3P02831 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.37□□□□□ -0.91
Hoxa3P02831 Lect2-202ENSMUST00000225183 823 ntBASIC9.37□□□□□ -0.91
Hoxa3P02831 Lgi3-203ENSMUST00000226548 1001 ntBASIC9.37□□□□□ -0.91
Hoxa3P02831 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Hoxa3P02831 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Hoxa3P02831 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Hoxa3P02831 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Hoxa3P02831 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.37□□□□□ -0.91
Hoxa3P02831 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.37□□□□□ -0.91
Hoxa3P02831 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
Hoxa3P02831 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.37□□□□□ -0.91
Hoxa3P02831 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Hoxa3P02831 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hoxa3P02831 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.37□□□□□ -0.91
Hoxa3P02831 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Hoxa3P02831 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Hoxa3P02831 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Hoxa3P02831 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.36□□□□□ -0.91
Hoxa3P02831 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.36□□□□□ -0.91
Hoxa3P02831 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Hoxa3P02831 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Hoxa3P02831 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.36□□□□□ -0.91
Hoxa3P02831 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Hoxa3P02831 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Hoxa3P02831 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC9.36□□□□□ -0.91
Hoxa3P02831 Gm8111-201ENSMUST00000117659 987 ntBASIC9.36□□□□□ -0.91
Hoxa3P02831 Gm12990-201ENSMUST00000120372 468 ntBASIC9.36□□□□□ -0.91
Hoxa3P02831 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Hoxa3P02831 Gm12030-201ENSMUST00000121917 223 ntBASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms