Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.93□□□□□ -0.66
Slc1a6O35544 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.93□□□□□ -0.66
Slc1a6O35544 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.93□□□□□ -0.66
Slc1a6O35544 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.93□□□□□ -0.66
Slc1a6O35544 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.93□□□□□ -0.66
Slc1a6O35544 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.93□□□□□ -0.66
Slc1a6O35544 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Slc1a6O35544 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Slc1a6O35544 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Gm4294-201ENSMUST00000105169 614 ntBASIC10.93□□□□□ -0.66
Slc1a6O35544 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.93□□□□□ -0.66
Slc1a6O35544 Gm12579-201ENSMUST00000118040 783 ntBASIC10.93□□□□□ -0.66
Slc1a6O35544 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Slc1a6O35544 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.93□□□□□ -0.66
Slc1a6O35544 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Gm24749-201ENSMUST00000157838 343 ntBASIC10.93□□□□□ -0.66
Slc1a6O35544 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Slc1a6O35544 Gm3150-201ENSMUST00000166418 204 ntBASIC10.93□□□□□ -0.66
Slc1a6O35544 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Slc1a6O35544 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Slc1a6O35544 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Gm42859-201ENSMUST00000199572 193 ntBASIC10.93□□□□□ -0.66
Slc1a6O35544 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.93□□□□□ -0.66
Slc1a6O35544 Gm7504-201ENSMUST00000201449 424 ntBASIC10.93□□□□□ -0.66
Slc1a6O35544 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.93□□□□□ -0.66
Slc1a6O35544 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.93□□□□□ -0.66
Slc1a6O35544 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Slc1a6O35544 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Slc1a6O35544 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Slc1a6O35544 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Slc1a6O35544 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc1a6O35544 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.93□□□□□ -0.66
Slc1a6O35544 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Slc1a6O35544 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Slc1a6O35544 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.92□□□□□ -0.66
Slc1a6O35544 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.92□□□□□ -0.66
Slc1a6O35544 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Slc1a6O35544 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.92□□□□□ -0.66
Slc1a6O35544 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.92□□□□□ -0.66
Slc1a6O35544 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.92□□□□□ -0.66
Slc1a6O35544 Gm19246-201ENSMUST00000173599 255 ntBASIC10.92□□□□□ -0.66
Slc1a6O35544 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.92□□□□□ -0.66
Slc1a6O35544 Gm38341-201ENSMUST00000195357 515 ntBASIC10.92□□□□□ -0.66
Slc1a6O35544 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Slc1a6O35544 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.92□□□□□ -0.66
Slc1a6O35544 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.92□□□□□ -0.66
Slc1a6O35544 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.92□□□□□ -0.66
Slc1a6O35544 AC137950.2-201ENSMUST00000227127 1089 ntBASIC10.92□□□□□ -0.66
Slc1a6O35544 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.92□□□□□ -0.66
Slc1a6O35544 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Slc1a6O35544 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Gm10288-201ENSMUST00000084614 537 ntBASIC10.92□□□□□ -0.66
Slc1a6O35544 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.92□□□□□ -0.66
Slc1a6O35544 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc1a6O35544 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 121.6 ms