Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Gm17836-201ENSMUST00000191976 1302 ntBASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Gm27444-201ENSMUST00000184157 137 ntBASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Gm37851-201ENSMUST00000193871 889 ntBASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Gm42617-201ENSMUST00000197640 1229 ntBASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc180J3QNE4 Gm12009-201ENSMUST00000121361 1100 ntBASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Gm24074-201ENSMUST00000158178 260 ntBASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Gm5801-201ENSMUST00000182247 780 ntBASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Gm42833-201ENSMUST00000196019 2124 ntBASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Gm8525-201ENSMUST00000189674 861 ntBASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Gm33707-201ENSMUST00000195135 569 ntBASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 AC140314.1-201ENSMUST00000219549 554 ntBASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 AC125409.3-201ENSMUST00000223488 653 ntBASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc180J3QNE4 Gm45206-201ENSMUST00000206885 2285 ntBASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 AC137950.2-202ENSMUST00000227150 1635 ntBASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Gm27833-201ENSMUST00000184285 124 ntBASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 AC107711.4-201ENSMUST00000228948 440 ntBASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Gm43963-201ENSMUST00000203466 2488 ntBASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc180J3QNE4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Ccdc180J3QNE4 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms