Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Gm11540-201ENSMUST00000117457 780 ntBASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Gm15549-201ENSMUST00000121595 622 ntBASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Gm7765-201ENSMUST00000182585 974 ntBASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Syngap1F6SEU4 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Gm22763-201ENSMUST00000158374 107 ntBASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Gm19228-201ENSMUST00000214030 717 ntBASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syngap1F6SEU4 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syngap1F6SEU4 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syngap1F6SEU4 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syngap1F6SEU4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syngap1F6SEU4 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syngap1F6SEU4 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syngap1F6SEU4 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Gm4294-201ENSMUST00000105169 614 ntBASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Gm25492-201ENSMUST00000157383 129 ntBASIC12.58□□□□□ -0.4
Syngap1F6SEU4 Gm25554-201ENSMUST00000158075 113 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms