Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Gm12218-201ENSMUST00000117666 399 ntBASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Gm16219-201ENSMUST00000120096 274 ntBASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Gm29067-201ENSMUST00000190821 470 ntBASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2aQ9DB34 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Mir7076-201ENSMUST00000183519 74 ntBASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Gm45550-201ENSMUST00000209380 946 ntBASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2aQ9DB34 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms