Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Gm22323-201ENSMUST00000103832 109 ntBASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Gm26047-201ENSMUST00000157308 113 ntBASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Gm8343-201ENSMUST00000182705 994 ntBASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Gm26047-202ENSMUST00000198840 115 ntBASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.33□□□□□ -0.76
Trim13Q9CYB0 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.33□□□□□ -0.76
Trim13Q9CYB0 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Gm22133-201ENSMUST00000102082 109 ntBASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Gm4157-201ENSMUST00000211647 679 ntBASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.32□□□□□ -0.76
Trim13Q9CYB0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim13Q9CYB0 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms