Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm8302-201ENSMUST00000119217 852 ntBASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Gm25492-201ENSMUST00000157383 129 ntBASIC12.73□□□□□ -0.37
Trim11Q99PQ2 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Mir7686-201ENSMUST00000200604 57 ntBASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim11Q99PQ2 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Gm11573-201ENSMUST00000119956 394 ntBASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim11Q99PQ2 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Gm15528-201ENSMUST00000117821 864 ntBASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Gm4654-201ENSMUST00000183305 982 ntBASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Gm19353-201ENSMUST00000184561 445 ntBASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim11Q99PQ2 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim11Q99PQ2 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trim11Q99PQ2 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim11Q99PQ2 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim11Q99PQ2 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim11Q99PQ2 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim11Q99PQ2 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim11Q99PQ2 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms