Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Gm22669-201ENSMUST00000158723 318 ntBASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Daam2-201ENSMUST00000057610 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Gm13169-201ENSMUST00000122090 1459 ntBASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Vmn1r44-203ENSMUST00000226120 1772 ntBASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Gm5046-201ENSMUST00000100608 611 ntBASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Elof1-201ENSMUST00000013966 888 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 AC154640.1-203ENSMUST00000228316 1618 ntBASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Gm43097-201ENSMUST00000196867 151 ntBASIC10.98□□□□□ -0.65
Cdh23Q99PF4 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 AC141884.2-201ENSMUST00000228811 775 ntBASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 A1cf-204ENSMUST00000224564 1432 ntBASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Gm24368-201ENSMUST00000175388 106 ntBASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Gm28179-201ENSMUST00000188365 613 ntBASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 BC002189-201ENSMUST00000195674 598 ntBASIC10.98□□□□□ -0.65
Cdh23Q99PF4 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Gm9515-201ENSMUST00000200276 647 ntBASIC10.98□□□□□ -0.65
Cdh23Q99PF4 AC167019.2-201ENSMUST00000227335 845 ntBASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh23Q99PF4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Gm12362-201ENSMUST00000121986 342 ntBASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Gm26931-201ENSMUST00000182273 609 ntBASIC10.97□□□□□ -0.65
Cdh23Q99PF4 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Gm38038-201ENSMUST00000193803 259 ntBASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms