Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12□□□□□ -0.49
Tlr3Q99MB1 Gm3793-201ENSMUST00000204973 672 ntBASIC12□□□□□ -0.49
Tlr3Q99MB1 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12□□□□□ -0.49
Tlr3Q99MB1 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12□□□□□ -0.49
Tlr3Q99MB1 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12□□□□□ -0.49
Tlr3Q99MB1 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tlr3Q99MB1 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tlr3Q99MB1 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tlr3Q99MB1 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tlr3Q99MB1 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tlr3Q99MB1 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12□□□□□ -0.49
Tlr3Q99MB1 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tlr3Q99MB1 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Tlr3Q99MB1 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tlr3Q99MB1 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tlr3Q99MB1 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tlr3Q99MB1 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tlr3Q99MB1 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12□□□□□ -0.49
Tlr3Q99MB1 Gm9035-201ENSMUST00000218318 1697 ntBASIC12□□□□□ -0.49
Tlr3Q99MB1 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12□□□□□ -0.49
Tlr3Q99MB1 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12□□□□□ -0.49
Tlr3Q99MB1 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Tlr3Q99MB1 Gm43482-201ENSMUST00000202797 1861 ntBASIC12□□□□□ -0.49
Tlr3Q99MB1 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tlr3Q99MB1 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tlr3Q99MB1 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms