Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.84□□□□□ -0.83
Scrt1Q99M85 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.84□□□□□ -0.83
Scrt1Q99M85 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.83□□□□□ -0.84
Scrt1Q99M85 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Gm16030-201ENSMUST00000159098 603 ntBASIC9.83□□□□□ -0.84
Scrt1Q99M85 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Gm7985-201ENSMUST00000183329 981 ntBASIC9.83□□□□□ -0.84
Scrt1Q99M85 Gm42430-201ENSMUST00000197209 616 ntBASIC9.83□□□□□ -0.84
Scrt1Q99M85 Gm5996-201ENSMUST00000211110 718 ntBASIC9.83□□□□□ -0.84
Scrt1Q99M85 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC9.83□□□□□ -0.84
Scrt1Q99M85 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.83□□□□□ -0.84
Scrt1Q99M85 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.83□□□□□ -0.84
Scrt1Q99M85 Arhgef33-210ENSMUST00000225548 456 ntBASIC9.83□□□□□ -0.84
Scrt1Q99M85 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Scrt1Q99M85 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Scrt1Q99M85 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm11502-201ENSMUST00000120917 1211 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm23400-201ENSMUST00000174994 102 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm26463-201ENSMUST00000175065 101 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm24332-201ENSMUST00000175102 102 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm25959-201ENSMUST00000175112 102 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm22475-201ENSMUST00000175169 102 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm22903-201ENSMUST00000175193 102 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm25070-201ENSMUST00000175237 102 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm24159-201ENSMUST00000175264 102 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm25299-201ENSMUST00000175283 102 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm23798-201ENSMUST00000175560 102 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm23802-201ENSMUST00000175565 102 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm25708-201ENSMUST00000177687 102 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm24370-201ENSMUST00000178007 102 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm23049-201ENSMUST00000178068 102 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm28019-201ENSMUST00000178138 101 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm25571-201ENSMUST00000178322 102 ntBASIC9.82□□□□□ -0.84
Scrt1Q99M85 Gm25355-201ENSMUST00000178456 101 ntBASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms