Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Mir8111-201ENSMUST00000184463 137 ntBASIC13.78□□□□□ -0.2
RtcbQ99LF4 Gm28671-201ENSMUST00000187036 692 ntBASIC13.78□□□□□ -0.2
RtcbQ99LF4 Gm37688-201ENSMUST00000195195 465 ntBASIC13.78□□□□□ -0.2
RtcbQ99LF4 Gm38349-201ENSMUST00000195732 462 ntBASIC13.78□□□□□ -0.2
RtcbQ99LF4 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
RtcbQ99LF4 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RtcbQ99LF4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.78□□□□□ -0.2
RtcbQ99LF4 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.78□□□□□ -0.2
RtcbQ99LF4 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RtcbQ99LF4 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RtcbQ99LF4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RtcbQ99LF4 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Gm5510-201ENSMUST00000117826 486 ntBASIC13.77□□□□□ -0.21
RtcbQ99LF4 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RtcbQ99LF4 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC13.77□□□□□ -0.21
RtcbQ99LF4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Mir1941-201ENSMUST00000157834 83 ntBASIC13.77□□□□□ -0.21
RtcbQ99LF4 Gm16228-201ENSMUST00000162286 809 ntBASIC13.77□□□□□ -0.21
RtcbQ99LF4 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC13.77□□□□□ -0.21
RtcbQ99LF4 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Gm37160-201ENSMUST00000193081 1689 ntBASIC13.77□□□□□ -0.21
RtcbQ99LF4 Gm8643-201ENSMUST00000195228 625 ntBASIC13.77□□□□□ -0.21
RtcbQ99LF4 Gm43726-201ENSMUST00000199110 775 ntBASIC13.77□□□□□ -0.21
RtcbQ99LF4 Gm44420-201ENSMUST00000203669 490 ntBASIC13.77□□□□□ -0.21
RtcbQ99LF4 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.77□□□□□ -0.21
RtcbQ99LF4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.77□□□□□ -0.21
RtcbQ99LF4 AC151836.1-201ENSMUST00000228730 1637 ntBASIC13.77□□□□□ -0.21
RtcbQ99LF4 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Gm25514-201ENSMUST00000083860 135 ntBASIC13.77□□□□□ -0.21
RtcbQ99LF4 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RtcbQ99LF4 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Gm29304-201ENSMUST00000186555 695 ntBASIC13.76□□□□□ -0.21
RtcbQ99LF4 Gm29223-201ENSMUST00000188867 695 ntBASIC13.76□□□□□ -0.21
RtcbQ99LF4 Gm37921-201ENSMUST00000194333 695 ntBASIC13.76□□□□□ -0.21
RtcbQ99LF4 Gm18555-201ENSMUST00000197935 584 ntBASIC13.76□□□□□ -0.21
RtcbQ99LF4 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC13.76□□□□□ -0.21
RtcbQ99LF4 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC13.76□□□□□ -0.21
RtcbQ99LF4 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.76□□□□□ -0.21
RtcbQ99LF4 AC117769.1-201ENSMUST00000224716 1120 ntBASIC13.76□□□□□ -0.21
RtcbQ99LF4 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RtcbQ99LF4 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.76□□□□□ -0.21
RtcbQ99LF4 Btrc-209ENSMUST00000224478 2194 ntBASIC13.76□□□□□ -0.21
RtcbQ99LF4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RtcbQ99LF4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms