Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Gm13408-201ENSMUST00000119822 798 ntBASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Gm13935-201ENSMUST00000121859 798 ntBASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Gm24992-201ENSMUST00000157412 130 ntBASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Gm8959-201ENSMUST00000213150 571 ntBASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim29Q8R2Q0 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Gm14395-201ENSMUST00000120494 563 ntBASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Gm10020-201ENSMUST00000081993 612 ntBASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim29Q8R2Q0 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim29Q8R2Q0 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim29Q8R2Q0 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim29Q8R2Q0 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.72□□□□□ -0.37
Trim29Q8R2Q0 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.72□□□□□ -0.37
Trim29Q8R2Q0 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim29Q8R2Q0 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms