Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup88Q8CEC0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup88Q8CEC0 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Gm25076-201ENSMUST00000104098 132 ntBASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Gm25072-201ENSMUST00000175233 235 ntBASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Gm10807-201ENSMUST00000177134 795 ntBASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Uba52-ps-201ENSMUST00000183770 379 ntBASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Gm45113-201ENSMUST00000207518 165 ntBASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Gm7183-201ENSMUST00000213870 1005 ntBASIC13.18□□□□□ -0.3
Nup88Q8CEC0 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup88Q8CEC0 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Gm12419-201ENSMUST00000116649 636 ntBASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Gm44158-201ENSMUST00000203881 505 ntBASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Gm7940-201ENSMUST00000218195 769 ntBASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Gm26660-202ENSMUST00000223620 4112 ntBASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 AC122273.1-201ENSMUST00000213634 2327 ntBASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup88Q8CEC0 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms