Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Gm15003-201ENSMUST00000118884 446 ntBASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Gm14234-201ENSMUST00000119539 845 ntBASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Gm19927-201ENSMUST00000185792 781 ntBASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Gm17889-201ENSMUST00000198410 598 ntBASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sh3rf2Q8BZT2 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Gm18201-201ENSMUST00000174735 875 ntBASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sh3rf2Q8BZT2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Gm5257-201ENSMUST00000121823 790 ntBASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Gm8451-201ENSMUST00000170338 447 ntBASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Gm4862-201ENSMUST00000170405 438 ntBASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Gm42430-201ENSMUST00000197209 616 ntBASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Gm5178-201ENSMUST00000219380 898 ntBASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Gm7536-201ENSMUST00000077389 444 ntBASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Gm5453-201ENSMUST00000080866 447 ntBASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Gm8420-201ENSMUST00000097103 598 ntBASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms