Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Gm28833-201ENSMUST00000189671 559 ntBASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Gm40332-201ENSMUST00000199847 938 ntBASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 AC154757.2-201ENSMUST00000228885 743 ntBASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Erich3-203ENSMUST00000189969 3460 ntBASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Gm9133-201ENSMUST00000118289 540 ntBASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Ap1g1-206ENSMUST00000179104 1096 ntBASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Gm39288-201ENSMUST00000210554 446 ntBASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh19Q80TF3 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Gm6024-201ENSMUST00000117850 1558 ntBASIC11□□□□□ -0.65
Pcdh19Q80TF3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms