Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Ift88Q61371 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ift88Q61371 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.3□□□□□ -0.44
Ift88Q61371 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
Ift88Q61371 Gm12266-201ENSMUST00000120311 962 ntBASIC12.3□□□□□ -0.44
Ift88Q61371 Gm15595-201ENSMUST00000120840 961 ntBASIC12.3□□□□□ -0.44
Ift88Q61371 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.3□□□□□ -0.44
Ift88Q61371 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.3□□□□□ -0.44
Ift88Q61371 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.3□□□□□ -0.44
Ift88Q61371 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Ntng1-201ENSMUST00000051253 327 ntBASIC12.3□□□□□ -0.44
Ift88Q61371 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.3□□□□□ -0.44
Ift88Q61371 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ift88Q61371 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ift88Q61371 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.3□□□□□ -0.44
Ift88Q61371 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.3□□□□□ -0.44
Ift88Q61371 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ift88Q61371 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ift88Q61371 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ift88Q61371 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.29□□□□□ -0.44
Ift88Q61371 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ift88Q61371 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ift88Q61371 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.29□□□□□ -0.44
Ift88Q61371 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.29□□□□□ -0.44
Ift88Q61371 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ift88Q61371 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Gm12218-201ENSMUST00000117666 399 ntBASIC12.29□□□□□ -0.44
Ift88Q61371 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.29□□□□□ -0.44
Ift88Q61371 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Ift88Q61371 Gm17040-202ENSMUST00000170597 889 ntBASIC12.29□□□□□ -0.44
Ift88Q61371 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.29□□□□□ -0.44
Ift88Q61371 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Gm44506-201ENSMUST00000206278 965 ntBASIC12.29□□□□□ -0.44
Ift88Q61371 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.29□□□□□ -0.44
Ift88Q61371 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ift88Q61371 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.29□□□□□ -0.44
Ift88Q61371 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.29□□□□□ -0.44
Ift88Q61371 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ift88Q61371 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ift88Q61371 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.29□□□□□ -0.44
Ift88Q61371 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ift88Q61371 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.29□□□□□ -0.44
Ift88Q61371 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.28□□□□□ -0.44
Ift88Q61371 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ift88Q61371 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ift88Q61371 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.28□□□□□ -0.44
Ift88Q61371 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.28□□□□□ -0.44
Ift88Q61371 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ift88Q61371 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ift88Q61371 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Ift88Q61371 Mir1938-201ENSMUST00000158746 100 ntBASIC12.28□□□□□ -0.44
Ift88Q61371 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ift88Q61371 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ift88Q61371 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Ift88Q61371 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ift88Q61371 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ift88Q61371 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ift88Q61371 Gm27441-201ENSMUST00000185000 105 ntBASIC12.28□□□□□ -0.44
Ift88Q61371 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ift88Q61371 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Ift88Q61371 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms