Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Gm12467-201ENSMUST00000117625 745 ntBASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Gm11340-201ENSMUST00000119226 412 ntBASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Gm44216-201ENSMUST00000203942 157 ntBASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Gm9520-201ENSMUST00000209460 1253 ntBASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.95□□□□□ -0.34
Rc3h1Q4VGL6 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Gm14213-201ENSMUST00000119778 768 ntBASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Gm25830-201ENSMUST00000158923 132 ntBASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Mir7035-201ENSMUST00000184713 82 ntBASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Gm4604-201ENSMUST00000025040 390 ntBASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Gm8181-201ENSMUST00000062242 669 ntBASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h1Q4VGL6 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms