Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Bbof1Q3V079 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.27□□□□□ -0.44
Bbof1Q3V079 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Bbof1Q3V079 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Gm14263-201ENSMUST00000117955 746 ntBASIC12.27□□□□□ -0.45
Bbof1Q3V079 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Gm7741-201ENSMUST00000181445 989 ntBASIC12.27□□□□□ -0.45
Bbof1Q3V079 Mir6546-201ENSMUST00000184460 62 ntBASIC12.27□□□□□ -0.45
Bbof1Q3V079 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.27□□□□□ -0.45
Bbof1Q3V079 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.27□□□□□ -0.45
Bbof1Q3V079 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.27□□□□□ -0.45
Bbof1Q3V079 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.27□□□□□ -0.45
Bbof1Q3V079 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.27□□□□□ -0.45
Bbof1Q3V079 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.27□□□□□ -0.45
Bbof1Q3V079 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bbof1Q3V079 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Gm14071-201ENSMUST00000117817 509 ntBASIC12.26□□□□□ -0.45
Bbof1Q3V079 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.26□□□□□ -0.45
Bbof1Q3V079 Gm9089-201ENSMUST00000122027 526 ntBASIC12.26□□□□□ -0.45
Bbof1Q3V079 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Gm4654-201ENSMUST00000183305 982 ntBASIC12.26□□□□□ -0.45
Bbof1Q3V079 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.26□□□□□ -0.45
Bbof1Q3V079 Gm43186-201ENSMUST00000198130 824 ntBASIC12.26□□□□□ -0.45
Bbof1Q3V079 Gm45118-201ENSMUST00000208928 825 ntBASIC12.26□□□□□ -0.45
Bbof1Q3V079 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.26□□□□□ -0.45
Bbof1Q3V079 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.26□□□□□ -0.45
Bbof1Q3V079 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.26□□□□□ -0.45
Bbof1Q3V079 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Bbof1Q3V079 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.25□□□□□ -0.45
Bbof1Q3V079 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.25□□□□□ -0.45
Bbof1Q3V079 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Bbof1Q3V079 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Bbof1Q3V079 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.25□□□□□ -0.45
Bbof1Q3V079 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Bbof1Q3V079 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Bbof1Q3V079 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Bbof1Q3V079 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Bbof1Q3V079 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Bbof1Q3V079 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Bbof1Q3V079 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Bbof1Q3V079 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Bbof1Q3V079 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Bbof1Q3V079 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Bbof1Q3V079 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Bbof1Q3V079 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.25□□□□□ -0.45
Bbof1Q3V079 Gm22711-201ENSMUST00000116890 133 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms